A.  Vijayan, Tofanelli, R., Strauss, S., Cerrone, L., Wolny, A., Strohmeier, J., Kreshuk, A., Hamprecht, F. A., Smith, R. S., and Schneitz, K., ?A Digital 3D Reference Atlas Reveals Cellular Growth Patterns Shaping the Arabidopsis Ovule?, eLife, 2021.

L. M.  Schütz, Louveaux, M., Vilches-Barro, A., Bouziri, S., Cerrone, L., Wolny, A., Kreshuk, A., Hamprecht, F. A., and Maizel, A., ?Integration of Cell Growth and Asymmetric Division during Lateral Root Initiation in Arabidopsis thaliana?, Plant and Cell Physiology, vol. 62, no. 8, pp. 1269-1279, 2021.

A.  Wolny, Cerrone, L., Vijayan, A., Tofanelli, R., Vilches-Barro, A., Louveaux, M., Wenzel, C., Strauss, S., Wilson-Sanchez, D., Lymbouridou, R., Steigleder, S. S., Pape, C., Bailoni, A., Duran-Nebreda, S., Bassel, G. W., Lohmann, J. U., Tsiantis, M., Hamprecht, F. A., Schneitz, K., Maizel, A., and Kreshuk, A., ?Accurate and Versatile 3D Segmentation of Plant Tissues at Cellular Resolution?, eLife, vol. 9, 2020.

S. T.  Radev, Mertens, U. K., Voss, A., Ardizzone, L., and Köthe, U., ?BayesFlow: Learning complex stochastic models with invertible neural networks?, 2020.

B.  Jähne, ?What controls air-sea gas exchange at extreme wind speeds? Evidence from laboratory experiments?, Recent Advances in the Study of Oceanic Whitecaps. Springer, pp. 133?150, 2020.

T. J.  Adler, Ayala, L., Ardizzone, L., Kenngott, H. G., Vemuri, A., Müller-Stich, B. P., Rother, C., Köthe, U., and Maier-Hein, L., ?Out of Distribution Detection for Intra-operative Functional Imaging?, in MICCAI UNSURE Workshop 2019, 2019, vol. 11840 LNCS, pp. 75?82.

P.  Voigt, ?Simulation and Measurement of the Water-sided Viscous Shear Stress without Waves?, Institut für Umweltphysik, Universität Heidelberg, Germany, 2019.

T.  Hoda?, Michel, F., Brachmann, E., Kehl, W., Buch, A. Glent, Kraft, D., Drost, B., Vidal, J., Ihrke, S., Zabulis, X., Sahin, C., Manhardt, F., Tombari, F., Kim, T. Kyun, Matas, J., and Rother, C., ?BOP: Benchmark for 6D object pose estimation?, in Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), 2018, vol. 11214 LNCS, pp. 19?35.

F.  Draxler, Veschgini, K., Salmhofer, M., and Hamprecht, F. A., ?Essentially No Barriers in Neural Network Energy Landscape?, ICML. Proceedings, vol. 80. p. 1308--1317, 2018.

A.  Vianello, Ackermann, J., Diebold, M., and Jähne, B., ?Robust Hough transform based 3D reconstruction from circular light fields?, in Conference on Computer Vision and Pattern Recognition (CVPR), 2018.

A.  Vianello, Manfredi, G., Diebold, M., and Jähne, B., ?3D reconstruction by a combined structure tensor and Hough transform light field approach?, tm - Technisches Messen, 2017.

E.  Bodnariuc, Petra, S., Schnörr, C., and Voorneveld, J., ?A Local Spatio-Temporal Approach to Plane Wave Ultrasound Particle Image Velocimetry?, in Proc. GCPR, 2017.

A.  Vianello, ?Robust 3D Surface Reconstruction from Light Fields?, vol. Dissertation. IWR, Univ. Heidelberg, 2017.

N.  von Schmude, ?Visual Localization with Lines?, vol. Dissertation. IWR, Univ. Heidelberg, 2017.

A.  Vianello, Manfredi, G., Diebold, M., and Jähne, B., ?3D Reconstruction by a Combined Structure Tensor and Hough Transform Light-Field Approach?, Forum Bildverarbeitung. 2016.

M.  von Borstel, Kandemir, M., Schmidt, P., Rao, M., Rajamani, K., and Hamprecht, F. A., ?Gaussian process density counting from weak supervision?, ECCV. Proceedings, vol. LNCS 9905. Springer, pp. 365-380 , 2016.

M.  von Borstel, ?Learning to Count from Weak Supervision?, University of Heidelberg, 2016.

N.  von Schmude, Lothe, P., and Jähne, B., ?Relative Pose Estimation from Straight Lines using Parallel Line Clustering and its Application to Monocular Visual Odometry?, in Proceedings of the 11th Joint Conference on Computer Vision, Imaging and Computer Graphics Theory and Applications, 2016.

M.  Kandemir, Haußmann, M., Diego, F., Rajamani, K., van der Laak, J., and Hamprecht, F. A., ?Variational weakly-supervised Gaussian processes?, BMVC. Proceedings. 2016.

A.  Biesdorf, Wörz, S., von Tengg-Kobligk, H., Rohr, K., and Schnörr, C., ?3D Segmentation of Vessels by Incremental Implicit Polynomial Fitting and Convex Optimization?, in Proc.~ISBI, 2015.

N.  Krah, Testa, M., Brons, S., Jäkel, O., Parodi, K., Voss, B., and Rinaldi, I., ?An advanced image processing method to improve the spatial resolution of ion radiographies?, Physics in Medicine and Biology, vol. 60, p. 8525, 2015.

A.  Kirillov, Savchynskyy, B., Schlesinger, D., Vetrov, D., and Rother, C., ?Inferring M-best diverse labelings in a single one?, in Proceedings of the IEEE International Conference on Computer Vision, 2015, vol. 2015 Inter, pp. 1814?1822.

A.  Kirillov, Schlesinger, D., Vetrov, D., Rother, C., and Savchynskyy, B., ?M-best-diverse labelings for submodular energies and beyond?, in Advances in Neural Information Processing Systems, 2015, vol. 2015-Janua, pp. 613?621.

S.  Zheng, Cheng, M. Ming, Warrell, J., Sturgess, P., Vineet, V., Rother, C., and Torr, P. H. S., ?Dense semantic image segmentation with objects and attributes?, in Proceedings of the IEEE Computer Society Conference on Computer Vision and Pattern Recognition, 2014, pp. 3214?3221.

M.  Kandemir, Klami, A., Gonen, M., Vetek, A., and Kaski, S., ?Multi-task and multi-view learning of user state?, Neurocomputing, vol. 139, pp. 97-106, 2014.

F.  Jug, Pietzsch, T., Kainmüller, D., Funke, J., Kaiser, M., van Nimwegen, E., Rother, C., and Myers, G., ?Optimal joint segmentation and tracking of escherichia coli in the mother machine?, Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), vol. 8677, pp. 25?36, 2014.

J.  Esparza, Vepa, L., Helmle, M., and Jähne, B., ?Registration of a multi-camera system with a 3D laser range finder?, in 9th Workshop Driver Assistance Systems (FAS2014), 26.-28.03.2014, Walting, 2014, p. 37--46.

V.  Vineet, Rother, C., and Torr, P. H. S., ?Higher order priors for joint intrinsic image, objects, and attributes estimation?, in Advances in Neural Information Processing Systems, 2013.

B.  Voss, Stapf, J., Berthe, A., and Garbe, C. S., ?Bichromatic Particle Streak Velocimetry bPSV -- Interfacial, v3C3D velocimetry using a single camera?, Exp. Fluids, 2012.

B.  Voss, ?Novel Single Camera Techniques for 3D3C Lagrangian Trajectory Measurements in Interfacial Flows?. IWR, Fakultät für Physik und Astronomie, Univ.\ Heidelberg, 2012.

C. S.  Garbe, Voss, B., and Stapf, J., ?Plenoptic Particle Streak Velocimetry (pPSV): 3D3C fluid flow measurement from light fields with a single plenoptic camera?, 16th International Symposium on Applications of Laser Techniques to Fluid Mechanics. Instituto Superior Técnico, pp. 1-12, 2012.

A.  Mansfield, Gehler, P., Van Gool, L., and Rother, C., ?Visibility maps for improving seam carving?, in Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), 2012, vol. 6554 LNCS, pp. 131?144.

S.  Vicente, Rother, C., and Kolmogorov, V., ?Object cosegmentation?, in Proceedings of the IEEE Computer Society Conference on Computer Vision and Pattern Recognition, 2011, pp. 2217?2224.

M.  Hanselmann, Voss, B., Renard, B. Y., Lindner, M., Köthe, U., Kirchner, M., and Hamprecht, F. A., ?SIMA: Simultaneous Multiple Alignment of LC/MS Peak Lists?, Bioinformatics, vol. 27 (7), pp. 987-993, 2011.

F.  Becker, Lenzen, F., Kappes, J. H., and Schnörr, C., ?Variational Recursive Joint Estimation of Dense Scene Structure andCamera Motion from Monocular High Speed Traffic Sequences?, in 2011 IEEE International Conference on Computer Vision ICCV, 2011, pp. 1692-1699.

S.  Vicente, Kolmogorov, V., and Rother, C., ?Cosegmentation revisited: Models and optimization?, in Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), 2010, vol. 6312 LNCS, pp. 465?479.

B.  Voss, Heinlein, A., Jähne, B., and Garbe, C. S., ?A new approach for 3C3D measurements of aqueous boundary layer flows relative to the wind-wave undulated interface?, in 6th Int. Symp. Gas Transfer at Water Surfaces, Kyoto, May 17--21, 2010, 2010.

B.  Voss and Garbe, C. S., ?Novel strategy for water sided interfacial 3D3Cflow-visualization using a single camera?, in 14th International Symposium on Flow Visualization, 2010, pp. D1-018.

A.  Vlasenko and Schnörr, C., ?Physically Consistent and Efficient Variational Denoising of Image Fluid Flow Estimates?, IEEE Trans.~Image Proc., vol. 19, pp. 586-595, 2010.

A.  Vlasenko and Schnörr, C., ?Physically Consistent and Efficient Variational Denoising of Image Fluid Flow Estimates?, IEEE Trans. Image Proc., vol. 19, pp. 586-595, 2010.

A.  Mansfield, Gehler, P., Van Gool, L., and Rother, C., ?Scene carving: Scene consistent image retargeting?, in Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), 2010, vol. 6311 LNCS, pp. 143?156.

F.  Lauer, Bloch, G., and Vidal, R., ?A Continuous Optimization Framework for Hybrid System Identification?, in submitted to Automatica, 2009.

C.  Thieke, Nix, O., Koehn, A., Floca, R., van Straaten, D., Hahn, H., Strauss, L. G., Siems, U., Graf, M., Pruem, H., Klein, J., Laue, H., and Kaster, F. O., ?A framework and multi-application prototype for integrated radiological diagnostics and radiation therapy?, Strahlentherapie und Onkologie, vol. 185, p. 81, 2009.

S.  Vicente, Kolmogorov, V., and Rother, C., ?Joint optimization of segmentation and appearance models?, in Proceedings of the IEEE International Conference on Computer Vision, 2009, pp. 755?762.

A.  Vlasenko and Schnörr, C., ?Variational Approaches for Model-Based PIV and Visual Fluid Analysis?, Imaging Measurement Methods for Flow Analysis, vol. 106. Springer, pp. 247-256, 2009.

A.  Vlasenko and Schnörr, C., ?Variational Approaches for Model-Based PIV and Visual Fluid Analysis?, Imaging Measurement Methods for Flow Analysis, vol. 106. Springer, pp. 247-256, 2009.

B.  Voss, ?Alignment and Retention Time Correction of LC-MS Data in Proteomics?, University of Heidelberg, 2008.

R.  Szeliski, Zabih, R., Scharstein, D., Veksler, O., Kolmogorov, V., Agarwala, A., Tappen, M., and Rother, C., ?A comparative study of energy minimization methods for Markov random fields with smoothness-based priors?, IEEE Transactions on Pattern Analysis and Machine Intelligence, vol. 30, pp. 1068?1080, 2008.

R.  Szeliski, Zabih, R., Scharstein, D., Veksler, O., Kolmogorov, V., Agarwala, A., Tappen, M., and Rother, C., ?A comparative study of energy minimization methods for Markov random fields with smoothness-based priors?, IEEE Transactions on Pattern Analysis and Machine Intelligence, vol. 30, pp. 1068?1080, 2008.

S.  Vicente, Kolmogorov, V., and Rother, C., ?Graph cut based image segmentation with connectivity priors?, in 26th IEEE Conference on Computer Vision and Pattern Recognition, CVPR, 2008.

A.  Vlasenko and Schnörr, C., ?Physically Consistent Variational Denoising of Image Fluid Flow Estimates?, in Pattern Recognition -- 30th DAGM Symposium, 2008, vol. 5096, p. 406--415.

A.  Vlasenko and Schnörr, C., ?Physically Consistent Variational Denoising of Image Fluid Flow Estimates?, in Pattern Recognition ? 30th DAGM Symposium, 2008, vol. 5096, pp. 406?415.

O.  Friedrich, Weber, C., Both, M., von Wegner, F., Chamberlain, J. S., Garbe, C. S., and Fink, R. H. A., ?Sarcomere Structure and Motor-Protein Function in an Animal Model of Duchenne Muscular Dystrophy (mdx mouse)?, in 87th Annual Meeting of the German Physiological Society, 2008.

T.  Hara, VanInwegen, E., Wendelbo, J., Schimpf, U., Jähne, B., Frew, N. M., and Jähne, B., ?Estimation of air-sea gas and heat fluxes from infrared imagery based on near surface turbulence models?, Transport at the Air Sea Interface --- Measurements, Models and Parameterizations. Springer-Verlag, 2007.

F.  Vogel, ?Spectroscopic Techniques for Gas-Exchange Measurements?, Institut für Umweltphysik, Fakultät für Physik und Astronomie, Univ.\ Heidelberg, 2006.

D.  Banerjee, Schabel, S., Garbe, C. S., Schimpf, U., Jähne, B., and von Spiegel, W., ?High resolution optical measurement techniques in paper drying?, Inpaper International - 9-10, vol. 4. p. 16--22, 2005.

F.  Vogel, ?Visualisierung von Gasaustauschprozessen durch Lumineszenzspektroskopie mit Ruthenium als Phosphoreszenzstoff?. 2004.

S.  Hader and Hamprecht, F. A., ?Efficient Density Clustering?, Between Data Science and Applied Data Analysis. Springer, pp. 39-48, 2003.

H.  Eisele and Hamprecht, F. A., ?A new approach for defect detection in X-ray CT images?, Pattern Recognition, vol. 2449. Springer, pp. 345-352, 2003.

F. A.  Hamprecht, Thiel, W., and van Gunsteren, W. F., ?Chemical library subset selection algorithms: a unified derivation using spatial statistics?, Journal of Chemical Information and Computer Sciences, vol. 42, pp. 414-428, 2002.

A.  Bruhn, Weickert, J., and Schnörr, C., ?Combining the Advantages of Local and Global Optic Flow Methods?, in Pattern Recognition, Proc. 24th DAGM Symposium, Zürich, Switzerland, 2002, vol. 2449, pp. 454?462.

H.  Spies and Garbe, C. S., ?Dense parameter fields from total least squares?, in Proceedings of the 24th DAGM Symposium on Pattern Recognition, 2002, vol. LNCS 2449, p. 379--386.

A.  Bruhn, Jakob, T., Fischer, M., Kohlberger, T., Weickert, J., Brüning, U., and Schnörr, C., ?Designing 3?D Nonlinear Diffusion Filters for High Performance Cluster Computing?, in Pattern Recognition, Proc. 24th DAGM Symposium, Zürich, Switzerland, 2002, vol. 2449, pp. 290?297.

C. S.  Garbe, Spies, H., and Jähne, B., ?Mixed OLS-TLS for the estimation of dynamic processes with a linear source term?, in Proceedings of the 24th DAGM Symposium on Pattern Recognition, 2002, vol. 2449, p. 463--471.

P. J.  Gee, Hamprecht, F. A., Schuler, L. D., van Gunsteren, W. F., Duchardt, E., Schwalbe, H., Albert, M., and Seebach, D., ?A molecular dynamics simulation study of the conformational preferences of oligo-(3- hydroxyalcanoic acids) in chloroform solution?, Helv. Chim. Acta, vol. 85, pp. 618-632, 2002.

D.  Cremers and Schnörr, C., ?Motion Competition: Variational Integration of Motion Segmentation and Shape Regularization?, in Pattern Recognition, Proc. 24th DAGM Symposium, Zürich, Switzerland, 2002, vol. 2449, pp. 472?480.

J.  Keuchel, Schnörr, C., Schellewald, C., and Cremers, D., ?Unsupervised Image Partitioning with Semidefinite Programming?, in Pattern Recognition, Proc. 24th DAGM Symposium, Zürich, Switzerland, 2002, vol. 2449, pp. 141?149.

F. A.  Hamprecht, Achleitner, U., Krismer, A. C., Lindner, K. H., Wenzel, V., Strohmenger, H. - U., Thiel, W., and van Gunsteren, W. F., ?Fibrillation power: An alternative method of ECG spectral analysis for prediction of countershock success in a porcine model of ventricular fibrillation?, Resuscitation, vol. 50, pp. 287-296, 2001.

F. A.  Hamprecht, Peter, C., Daura, X., Thiel, W., and van Gunsteren, W. F., ?A strategy for analysis of (molecular) equilibrium simulations: configuration space density estimation, clustering and visualization?, Journal of Chemical Physics, vol. 114, pp. 2079-2089, 2001.

D.  Uttenweiler, Veigel, C., Steubing, R., Götz, C., Mann, S., Haußecker, H., Jähne, B., and Fink, R. H. A., ?Motion determination in actin filament fluorescence images with a spatio-temporal orientation analysis method.?, Biophys J, vol. 78, p. 2709--2715, 2000.

B.  Jähne and Haußecker, H., ?Performance characteristics of low-level motion estimation in spatiotemporal images?, Performance Characterization in Computer Vision. Kluwer, Dordrecht, pp. pp. 139-152, 2000.

H.  Spies, Jähne, B., and Barron, J. L., ?Regularised range flow?, in European Conference on Computer Vision (ECCV), 2000, vol. 2, p. 785--799.

M.  Stöhr, Garbe, C. S., Engelmann, D., Geißler, P., Gomes, S., Hering, F., Jähne, B., Keil, F., Mackens, W., Voß, H., and Wagner, H. - G., ?4D particle tracking velocimetry applied to gas-liquid reactors?, in In Scientific Computing in Chemical Engineering II - Simulation, Image Processing, Optimization and Control., J.  Werther, Ed. Springer Verlag, 1999, p. 270--279.

A. H. M.  Blom, Brassel, J. - O., von Brocke, M., and Mittler, M., ?Quality classification and process control of micro-spot laser welding?, in Proceedings of the Ninth International FAIM Conference - Flexible Automation and Intelligent Manufacturing, Tilburg, 1999, p. 929--941.

F. A.  Hamprecht, Scott, W. R. P., and van Gunsteren, W. F., ?Generation of pseudo-native protein structures for threading?, Proteins, vol. 28, pp. 522-529, 1997.

J. A. M.  Janssen, Calkoen, C. J., van Halsema, D., Jähne, B., Janssen, P. A. E. M., Oost, W. A., Snoeij, P., Vogelzang, J., and Wallbrink, H., ?The VIERS scatterometer algorithm?, in Proc.\ The Air-Sea Interface, Radio and Acoustic Sensing, Turbulence and Wave Dynamics, Marseille, 24--30. June 1993, 1996, p. 749--754.

P.  van Vliet, Hering, F., Jähne, B., and Jähne, B., ?Delft Hydraulics Large Wind-Wave Flume?, in Air-Water Gas Transfer---Selected Papers from the Third International Symposium of Air--Water Gas Transfer in Heidelberg, 1995, p. 499--502.

J. A. M.  Janssen, Calkoen, C. J., van Halsema, D., Jähne, B., Janssen, P. A. E. M., Oost, W. A., Snoeij, P., Vogelzang, J., and Wallbrink, H., ?The VIERS scatterometer algorithm?, in Proc. The Air-Sea Interface, Radio and Acoustic Sensing, Turbulence and Wave Dynamics, Marseille, 24--30. June 1993, 1993, p. 749--754.

D.  van Halsema, Calkoen, C. J., Oost, W. A., Snoeij, P., Vogelzang, J., and Jähne, B., ?Comparisons of backscattering calculations with measurements made in a large wind/wave flume?, in Proc. IGARSS'92, 1992, vol. 2, p. 1451--1453.

P.  Snoeij, van Halsema, D., Oost, W. A., Calkoen, C. J., Jähne, B., and Vogelzang, J., ?Microwave backscatter measurements made from the Dutch Ocean Research Tower 'Noordwijk' compared with model predictions?, in Proc. IGARSS'92, 1992.

P.  Snoeij, van Halsema, D., Oost, W. A., Calkoen, C. J., Vogelzang, J., and Jähne, B., ?Comparison of microwave backscatter measurements and small-scale surface wave measurements made from the Dutch ocean research tower 'Noordwijk'?, in Proceedings IGARSS '91, 1991, vol. 3, p. 1289--1292.

D.  van Halsema, Calkoen, C. J., Oost, W. A., Snoeij, P., Vogelzang, J., and Jähne, B., ?Dual-polarized scatterometer measurements of wind and mechanically generated waves in a very large wind/wave flume, the VIERS-1 project?, in Proc.\ 5th Int. Coll. Physical Measurements and Signatures in Remote Sensing, Courchevel, France, 1991, vol. ESA SP-319, p. 247--252.

B.  Jähne and Jähne, B., ?Evaluation of a two-scale model using extensive radar backscatter and wave measurements in a large wind-wave flume?, in Proceedings IGARSS '91, 1991, vol. 2, p. 885--888.

D.  van Halsema, Snoeij, P., Calkoen, C. J., Oost, W. A., Vogelzang, J., and Jähne, B., ?Modulation of the microwave backscatter by long gravity waves as measured in a very large wind/wave flume?, in Proc. IGARSS '91, 1991, vol. 3, p. 1293--1296.

P.  Snoeij, Calkoen, C. J., Oost, W. A., van Halsema, D., Vogelzang, J., and Jähne, B., ?Dual-polarized scatterometer measurements of generated Wind and Gravity Wave in a Very Large Wind/Wave Tank?, in Proc. IGARSS'90, 1990, p. 2157--2160.

P.  Snoeij, Vogelzang, J., Calkoen, C. J., Oost, W. A., van Halsema, D., and Jähne, B., ?A high resolution scatterometer for radar backscatter measurements of wind generated waves in wind/wave tanks?, in European Micro Wave Conference 1990, 1990.

D.  van Halsema, Calkoen, C. J., Oost, W. A., Snoeij, P., and Jähne, B., ?Comparisons of X-band Radar Backscatter Measurements with Area extended wave slop measurements made in a large Wind/Wave Tank?, in Proc. IGARSS'89, 1989, vol. 5, p. 2997--3001.

D.  van Halsema, de Loor, P., and Jähne, B., ?VIERS-1: A Programme of Wind Scatterometry?, in Geoscience and Remote Sensing Symposium, Proc.\ IGARSS'88, 1988, vol. 1, p. 572.