Publications

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2021
M. Kandemir, Agkül, A., Haußmann, M., and Ünal, G., Evidential Turing Processes. arXiv preprint, 2021.
A. Andersson, Diego, F., Hamprecht, F. A., and Wählby, C., ISTDECO: In Situ Transcriptomics Decoding by Deconvolution, bioRxiv, 2021.
M. Afifi, Derpanis, K. G., Ommer, B., and Brown, M. S., Learning Multi-Scale Photo Exposure Correction, in Proceedings of the IEEE Conference on Computer Vision and Pattern Recognition (CVPR), 2021.
C. Pape, Remme, R., Wolny, A., Olberg, S., Wolf, S., Cerrone, L., Cortese, M., Klaus, S., Lucic, B., Ullrich, S., Anders-Össwein, M., Wolf, S., Cerikan, B., Neufeldt, C. J., Ganter, M., Schnitzler, P., Merle, U., Lusic, M., Boulant, S., Stanifer, M., Bartenschlager, R., Hamprecht, F. A., Kreshuk, A., Tischer, C., Kräusslich, H. - G., Müller, B., and Laketa, V., Microscopy-based assay for semi-quantitative detection of SARS-CoV-2 specific antibodies in human sera, BioEssays, vol. 43, no. 3, 2021.
H. Arlt, Sui, X., Folger, B., Adams, C., Chen, X., Remme, R., Hamprecht, F. A., DiMaio, F., Liao, M., Goodman, J. M., Farese, R. V., and Walther, T. C., Seipin forms a flexible cage at lipid droplet formation sites. bioRxiv, 2021.
H. Arlt, Sui, X., Folger, B., Adams, C., Chen, X., Remme, R., Hamprecht, F. A., DiMaio, F., Liao, M., Goodman, J. M., Farese, R. V., and Walther, T. C., Seipin forms a flexible cage at lipid droplet formation sites. bioRxiv, 2021.
2019
J. Kruse, Ardizzone, L., Rother, C., and Köthe, U., Benchmarking Invertible Architectures on Inverse Problems, i, 2019.
A. Imle, Kumberger, P., Schnellbächer, N. D., Fehr, J., Carillo-Bustamente, P., Ales, J., Schmidt, P., Ritter, C., Godinez, W. J., Müller, B., Rohr, K., Hamprecht, F. A., Schwarz, U. S., Graw, F., and Fackler, O. T., Experimental and computational analyses reveal that environmental restrictions shape HIV-1 spread in 3D cultures, Nature Communications, vol. 13;10(1), 2019.
H. Abu Alhaija, Mustikovela, S. Karthik, Geiger, A., and Rother, C., Geometric Image Synthesis, in Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), 2019, vol. 11366 LNCS, pp. 85–100.
L. Ardizzone, Lüth, C., Kruse, J., Rother, C., and Köthe, U., Guided Image Generation with Conditional Invertible Neural Networks, 2019.
L. Ardizzone, Lüth, C., Kruse, J., Rother, C., and Köthe, U., Guided Image Generation with Conditional Invertible Neural Networks, 2019.
S. Berg, Kutra, D., Kroeger, T., Straehle, C. N., Kausler, B. X., Haubold, C., Schiegg, M., Ales, J., Beier, T., Rudy, M., Eren, K., Cervantes, J. I., Xu, B., Beuttenmüller, F., Wolny, A., Zhang, C., Köthe, U., Hamprecht, F. A., and Kreshuk, A., ilastik: interactive machine learning for (bio)image analysis, Nature Methods, vol. 16, pp. 1226-1232, 2019.
T. J. Adler, Ayala, L., Ardizzone, L., Kenngott, H. G., Vemuri, A., Müller-Stich, B. P., Rother, C., Köthe, U., and Maier-Hein, L., Out of Distribution Detection for Intra-operative Functional Imaging, in MICCAI UNSURE Workshop 2019, 2019, vol. 11840 LNCS, pp. 75–82.PDF icon PDF (3.1 MB)
T. J. Adler, Ayala, L., Ardizzone, L., Kenngott, H. G., Vemuri, A., Müller-Stich, B. P., Rother, C., Köthe, U., and Maier-Hein, L., Out of Distribution Detection for Intra-operative Functional Imaging, in MICCAI UNSURE Workshop 2019, 2019, vol. 11840 LNCS, pp. 75–82.PDF icon PDF (3.1 MB)
T. J. Adler, Ayala, L., Ardizzone, L., Kenngott, H. G., Vemuri, A., Müller-Stich, B. P., Rother, C., Köthe, U., and Maier-Hein, L., Out of Distribution Detection for Intra-operative Functional Imaging, in MICCAI UNSURE Workshop 2019, 2019, vol. 11840 LNCS, pp. 75–82.PDF icon PDF (3.1 MB)
2018
H. Abu Alhaija, Mustikovela, S. Karthik, Mescheder, L., Geiger, A., and Rother, C., Augmented Reality Meets Computer Vision, International Journal of Computer Vision, vol. In press, pp. 1–13, 2018.
H. Abu Alhaija, Mustikovela, S. Karthik, Mescheder, L., Geiger, A., and Rother, C., Augmented Reality Meets Computer Vision: Efficient Data Generation for Urban Driving Scenes, International Journal of Computer Vision, vol. 126, pp. 961–972, 2018.
H. Abu Alhaija, Mustikovela, S. K., Mescheder, A., Geiger, C., and Rother, C., Augmented Reality Meets Computer Vision Efficient Data Generation for Urban Driving Scenes, IJCV, pp. 1-12, 2018.PDF icon Technical Report (3.83 MB)
A. Arnab, Zheng, S., Jayasumana, S., Romera-paredes, B., Kirillov, A., Savchynskyy, B., Rother, C., Kahl, F., and Torr, P., Conditional Random Fields Meet Deep Neural Networks for Semantic Segmentation, Cvpr, vol. XX, pp. 1–15, 2018.
H. Abu Alhaija, Mustikovela, S. K., Geiger, A., and Rother, C., Geometric Image Synthesis, ACCV. Proceedings, in press. 2018.PDF icon Technical Report (1.83 MB)
R. Hühnerbein, Savarino, F., Aström, F., and Schnörr, C., Image Labeling Based on Graphical Models Using Wasserstein Messages and Geometric Assignment, SIAM Journal on Imaging Sciences, vol. 11, no. 2, pp. 1317-1362, 2018.PDF icon Technical Report (2.62 MB)
R. Hühnerbein, Savarino, F., Aström, F., and Schnörr, C., Image Labeling Based on Graphical Models Using Wasserstein Messages and Geometric Assignment, SIAM J. Imaging Science, vol. 11, pp. 1317–1362, 2018.
W. Erb, Weinmann, A., Ahlborg, M., Brandt, C., Bringout, G., Buzug, T. M., Frikel, J., Kaethner, C., Knopp, T., März, T., Möddel, M., Storath, M., and Weber, A., Mathematical Analysis of the 1D Model and Reconstruction Schemes for Magnetic Particle Imaging, Inverse Problems, vol. 34, no. 5, 2018.
A. Vianello, Ackermann, J., Diebold, M., and Jähne, B., Robust Hough transform based 3D reconstruction from circular light fields, in Conference on Computer Vision and Pattern Recognition (CVPR), 2018.
N. Rahaman, Arpit, D., Baratin, A., Draxler, F., Lin, M., Hamprecht, F. A., Bengio, Y., and Courville, A., On the spectral bias of deep neural networks, arXiv preprint arXiv:1806.08734, 2018.
A. Zern, Zisler, M., Aström, F., Petra, S., and Schnörr, C., Unsupervised Label Learning on Manifolds by Spatially Regularized Geometric Assignment, in GCPR, 2018.
A. Zern, Zisler, M., Aström, F., Petra, S., and Schnörr, C., Unsupervised Label Learning on Manifolds by Spatially Regularized Geometric Assignment, GCPR. Proceedings. pp. 698-713, 2018.PDF icon Technical Report (5.23 MB)

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