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2022
E. Fita, Damrich, S., and Hamprecht, F. A., “The Algebraic Path Problem for Graph Metrics”, 39th International Conference on Machine Learning, PMLR. Proceedings , vol. 162. pp. 19178-19204, 2022.
2021
E. Fita, Damrich, S., and Hamprecht, F. A., “Directed Probabilistic Watershed”, NeurIPS. Proceedings, vol. 34. 2021.PDF icon Technical Report (957.78 KB)
E. Jenner, Fita, E., and Hamprecht, F. A., “Extensions of Karger's Algorithm: Why They Fail in Theory and How They Are Useful in Practice”, ICCV. Proceedings. pp. 4602-4611, 2021.PDF icon Technical Report (1.1 MB)
H. Arlt, Sui, X., Folger, B., Adams, C., Chen, X., Remme, R., Hamprecht, F. A., DiMaio, F., Liao, M., Goodman, J. M., Farese, R. V., and Walther, T. C., “Seipin forms a flexible cage at lipid droplet formation sites”. bioRxiv, 2021.
H. Arlt, Sui, X., Folger, B., Adams, C., Chen, X., Remme, R., Hamprecht, F. A., DiMaio, F., Liao, M., Goodman, J. M., Farese, R. V., and Walther, T. C., “Seipin forms a flexible cage at lipid droplet formation sites”. bioRxiv, 2021.
B. Brattoli, Büchler, U., Dorkenwald, M., Reiser, P., Filli, L., Helmchen, F., Wahl, A. - S., and Ommer, B., “Unsupervised behaviour analysis and magnification (uBAM) using deep learning”, Nature Machine Intelligence, 2021.
2020
S. Wolf, Hamprecht, F. A., and Funke, J., “Inpainting Networks Learn to Separate Cells in Microscopy Images”, BMCV. 2020.PDF icon Technical Report (357.23 KB)
S. Wolf, Hamprecht, F. A., and Funke, J., “Instance Separation Emerges from Inpainting”, arXiv preprint arXiv:2003.00891, 2020.
S. Friman, “Laboratory investigations of concentration and wind profiles close to the wind-driven wavy water surface”, vol. Dissertation. Institut für Umweltphysik, Fakultät für Physik und Astronomie, Univ. Heidelberg, Heidelberg, 2020.
B. Jähne, “Struktur und Chaos: Kleinskalige Austauschprozesse zwischen Atmosphäre und Meer”, Heidelberger Jahrbücher Online, Entwicklung – Wie aus Prozessen Strukturen werden, vol. 5. pp. 133–150, 2020.
2019
J. Kleesiek, Morshuis, J. Nikolas, Isensee, F., Deike-Hofmann, K., Paech, D., Kickingereder, P., Köthe, U., Rother, C., Forsting, M., Wick, W., Bendszus, M., Schlemmer, H. Peter, and Radbruch, A., “Can Virtual Contrast Enhancement in Brain MRI Replace Gadolinium?: A Feasibility Study”, Investigative Radiology, vol. 54, pp. 653–660, 2019.
A. Imle, Kumberger, P., Schnellbächer, N. D., Fehr, J., Carillo-Bustamente, P., Ales, J., Schmidt, P., Ritter, C., Godinez, W. J., Müller, B., Rohr, K., Hamprecht, F. A., Schwarz, U. S., Graw, F., and Fackler, O. T., “Experimental and computational analyses reveal that environmental restrictions shape HIV-1 spread in 3D cultures”, Nature Communications, vol. 13;10(1), 2019.
A. Imle, Kumberger, P., Schnellbächer, N. D., Fehr, J., Carillo-Bustamente, P., Ales, J., Schmidt, P., Ritter, C., Godinez, W. J., Müller, B., Rohr, K., Hamprecht, F. A., Schwarz, U. S., Graw, F., and Fackler, O. T., “Experimental and computational analyses reveal that environmental restrictions shape HIV-1 spread in 3D cultures”, Nature Communications, vol. 13;10(1), 2019.
S. I. Friman and Jähne, B., “Investigating SO2 transfer across the air–water interface via LIF”, Exp. Fluids, vol. 60, p. 65, 2019.
E. Fita, “Semi-supervised distance-based segmentation”, Heidelberg University, 2019.
2018
D. Fortun, Storath, M., Rickert, D., Weinmann, A., and Unser, M., “Fast Piecewise-Affine Motion Estimation Without Segmentation”, IEEE Transactions on Image Processing, vol. 27 , no. 11, pp. 5612 - 5624, 2018.
W. Erb, Weinmann, A., Ahlborg, M., Brandt, C., Bringout, G., Buzug, T. M., Frikel, J., Kaethner, C., Knopp, T., März, T., Möddel, M., Storath, M., and Weber, A., “Mathematical Analysis of the 1D Model and Reconstruction Schemes for Magnetic Particle Imaging”, Inverse Problems, vol. 34, no. 5, 2018.
2017
L. Flothow, “Bubble Characteristics from Breaking Waves in Fresh Water and Simulated Seawater”, Institut für Umweltphysik, Universität Heidelberg, Germany, 2017.
S. Ramos, Gehrig, S., Pinggera, P., Franke, U., and Rother, C., “Detecting unexpected obstacles for self-driving cars: Fusing deep learning and geometric modeling”, in IEEE Intelligent Vehicles Symposium, Proceedings, 2017, pp. 1025–1032.
M. Bautista, Fuchs, P., and Ommer, B., “Learning Where to Drive by Watching Others”, Proceedings of the German Conference Pattern Recognition, vol. 1. Springer-Verlag, Basel, 2017.
2016
J. Mund, Michel, F., Dieke-Meier, F., Fricke, H., Meyer, L., and Rother, C., “Introducing LiDAR Point Cloud-based Object Classification for Safer Apron Operations”, in International Symposium on Enhanced Solutions for Aircraft and Vehicle Surveillance Applications, 2016.
P. Pinggera, Ramos, S., Gehrig, S., Franke, U., Rother, C., and Mester, R., “Lost and found: Detecting small road hazards for self-driving vehicles”, in IEEE International Conference on Intelligent Robots and Systems, 2016, vol. 2016-Novem, pp. 1099–1106.
2015
J. Funke, Hamprecht, F. A., and Zhang, C., “Learning to Segment: Training Hierarchical Segmentation under a Topological Loss”, in MICCAI. Proceedings, Part III, 2015, vol. 9351, pp. 268-275.PDF icon Technical Report (2.92 MB)
J. Funke, Hamprecht, F. A., and Zhang, C., “Learning to Segment: Training Hierarchical Segmentation under a Topological Loss”, in MICCAI. Proceedings, Part III, 2015, vol. 9351, pp. 268-275.PDF icon Technical Report (2.92 MB)
F. Friedl, Krah, N., and Jähne, B., “Optical sensing of oxygen using a modified Stern-Volmer equation for high laser irradiance”, Sensors and Actuators B: Chemical, vol. 206, p. 336--342, 2015.
F. Friedl, Krah, N., and Jähne, B., “Optical sensing of oxygen using a modified Stern-Volmer equation for high laser irradiance”, Sensors and Actuators B: Chemical, vol. 206, pp. 336–342, 2015.
J. Mund, Zouhar, A., Meyer, L., Fricke, H., and Rother, C., “Performance evaluation of LiDAR point clouds towards automated FOD detection on airport aprons”, in Proceedings of ATACCS 2015 - 5th International Conference on Application and Theory of Automation in Command and Control Systems, 2015, pp. 85–94.
J. Mund, Zouhar, A., Meyer, L., Fricke, H., and Rother, C., “Performance evaluation of LiDAR point clouds towards automated FOD detection on airport aprons”, in Proceedings of ATACCS 2015 - 5th International Conference on Application and Theory of Automation in Command and Control Systems, 2015, pp. 85–94.
R. Nair, Fitzgibbon, A., Kondermann, D., and Rother, C., “Reflection modeling for passive stereo”, in Proceedings of the IEEE International Conference on Computer Vision, 2015, vol. 2015 Inter, pp. 2291–2299.
A. Zouhar, Rother, C., and Fuchs, S., “Semantic 3-D labeling of ear implants using a global parametric transition prior”, in Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), 2015, vol. 9350, pp. 177–184.
A. Kreshuk, Funke, J., Cardona, A., and Hamprecht, F. A., “Who is talking to whom: synaptic partner detection in anisotropic volumes of insect brain”, MICCAI. Proceedings, vol. LNCS 9349. Springer, pp. 661-668, 2015.PDF icon Technical Report (2.14 MB)
2014
E. Eyjolfsdottir, Branson, S., Burgos-Artizzu, X. P., Hoopfer, E. D., Schor, J., Anderson, D. J., and Perona, P., “Detection of social actions in fruit flies”, Lecture Notes in Computer Science, vol. 8690, pp. 772–787, 2014.
M. Kandemir, Feuchtinger, A., Walch, A., and Hamprecht, F. A., “Digital Pathology: Multiple instance learning can detect Barrett'scancer”, ISBI. Proceedings. pp. 1348-1351, 2014.PDF icon Technical Report (2.86 MB)
A. Denitiu, Petra, S., Schnörr, C., and Schnörr, C., “An Entropic Perturbation Approach to TV-Minimization for Limited-Data Tomography”, in Discrete Geometry for Computer Imagery (DGCI) 2014, 2014, pp. 262–274.
A. Denitiu, Petra, S., Schnörr, C., and Schnörr, C., “An Entropic Perturbation Approach to TV-Minimization for Limited-Data Tomography”, in Discrete Geometry for Computer Imagery (DGCI) 2014, 2014, p. 262--274.PDF icon Technical Report (894.83 KB)

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