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2011

P. Vincent Gehler, Rother, C., Kiefel, M., Zhang, L., and Schölkopf, B., “Recovering intrinsic images with a global sparsity prior on reflectance”, in Advances in Neural Information Processing Systems 24: 25th Annual Conference on Neural Information Processing Systems 2011, NIPS 2011, 2011.

M. Hanselmann, Voss, B., Renard, B. Y., Lindner, M., Köthe, U., Kirchner, M., and Hamprecht, F. A., “SIMA: Simultaneous Multiple Alignment of LC/MS Peak Lists”, Bioinformatics, vol. 27 (7), pp. 987-993, 2011.

Technical Report (2.2 MB)

C. Rother, “Sparse Higher Order Functions of Discrete Variables–-Representation and Optimization”, research.microsoft.com, vol. 45, 2011.

W. Mischler, Rocholz, R., and Weissbach, T., “Vereinfachung der Massenbilanz im Blasentank für luftseitige Messung”, Institut für Umweltphysik, 2011.

M. Pfannmöller, Flügge, H., Benner, G., Wacker, I., Sommer, C., Hanselmann, M., Schmale, S., Schmidt, H., Hamprecht, F. A., Rabe, T., Kowalsky, W., and Schröder, R., “Visualizing a homogeneous blend in bulk heterojunction polymer solar cells by analytical electron microscopy”, Nano Letters, vol. 11, pp. 3099-3107, 2011.

2010

R. Rocholz, “Calibration of the 2010-CISG Setup at the Aeolotron”, Institute of Environmental Physics, University of Heidelberg, 2010.

M. Kirchner, Renard, B. Y., Köthe, U., Pappin, D. J., Hamprecht, F. A., Steen, J. A. J., and Steen, H., “Computational Protein Profile Similarity Screening for Quantitative Mass Spectrometry Experiments”, Bioinformatics, vol. 26 (1), pp. 77-83, 2010.

Technical Report (380.19 KB)

S. Vicente, Kolmogorov, V., and Rother, C., “Cosegmentation revisited: Models and optimization”, in Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), 2010, vol. 6312 LNCS, pp. 465–479.

X. Lou, Kirchner, M., Renard, B. Y., Köthe, U., Graf, C., Lee, C., Steen, J. A. J., Steen, H., Mayer, M. P., and Hamprecht, F. A., “Deuteration Distribution Estimation with Improved Sequence Coverage for HX/MS Experiments”, Bioinformatics, vol. 26(12), pp. 1535-1541, 2010.

Technical Report (518.01 KB)

B. Y. Renard, Timm, W., Kirchner, M., Steen, J. A. J., Hamprecht, F. A., and Steen, H., “Estimating the Confidence of Peptide Identifications without Decoy Databases”, Analytical Chemistry, pp. 4314-4318, 2010.

Technical Report (619.11 KB)

K. Börner, Hermle, J., Sommer, C., Brown, N. P., Knapp, B., Glass, B., Torralba, G., Reymann, J., Beil, N., Beneke, J., Pepperkok, R., Schneider, R., and Ludwig, T., “From experimental setup to bioinformatics: An RNAi screening platform to identify host factors involved in HIV-1 replication”, Biotechnology Journal, vol. 5, pp. 39-49, 2010.

Technical Report (556.09 KB)

V. Lempitsky, Rother, C., Roth, S., and Blake, A., “Fusion moves for markov random field optimization”, IEEE Transactions on Pattern Analysis and Machine Intelligence, vol. 32, pp. 1392–1405, 2010.

V. Lempitsky, Rother, C., Roth, S., and Blake, A., “Fusion moves for markov random field optimization”, IEEE Transactions on Pattern Analysis and Machine Intelligence, vol. 32, pp. 1392–1405, 2010.

V. Lempitsky, Rother, C., Roth, S., and Blake, A., “Fusion moves for markov random field optimization”, IEEE Transactions on Pattern Analysis and Machine Intelligence, vol. 32, pp. 1392–1405, 2010.

V. Lempitsky, Rother, C., Roth, S., and Blake, A., “Fusion moves for markov random field optimization”, IEEE Transactions on Pattern Analysis and Machine Intelligence, vol. 32, pp. 1392–1405, 2010.

V. Gulshan, Rother, C., Criminisi, A., Blake, A., and Zisserman, A., “Geodesic star convexity for interactive image segmentation”, in Proceedings of the IEEE Computer Society Conference on Computer Vision and Pattern Recognition, 2010, pp. 3129–3136.

H. Nickisch, Rother, C., Kohli, P., and Rhemann, C., “Learning an Interactive Segmentation System - Supplemental Material”, 2010.

H. Nickisch, Rother, C., Kohli, P., and Rhemann, C., “Learning an Interactive Segmentation System - Supplemental Material”, 2010.

M. Jehle, Sommer, C., and Jähne, B., “Learning of Optimal Illumination for Material Classification”, in Proceedings of the 32nd DAGM Symposium on Pattern Recognition, Darmstadt, Germany, 2010, pp. 563-572.

M. Jehle, Sommer, C., and Jähne, B., “Learning of optimal illumination for material classification”, in Pattern Recognition, 2010, vol. 6376, p. 563--572.

C. Rother, Kohli, P., Feng, W., and Jia, J., “Minimizing sparse higher order energy functions of discrete variables”, 2010, pp. 1382–1389.

D. Singaraju, Rother, C., and Rhemann, C., “New appearance models for natural image matting”, 2010, pp. 659–666.

D. Singaraju, Rother, C., and Rhemann, C., “New appearance models for natural image matting”, 2010, pp. 659–666.

B. Y. Renard, “Robust Methods for the Proteomic Data Analysis Pipeline”. University of Heidelberg, 2010.

A. Mansfield, Gehler, P., Van Gool, L., and Rother, C., “Scene carving: Scene consistent image retargeting”, in Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), 2010, vol. 6311 LNCS, pp. 143–156.

C. Rhemann, Rother, C., Kohli, P., and Gelautz, M., “A spatially varying PSF-based prior for alpha matting”, in Proceedings of the IEEE Computer Society Conference on Computer Vision and Pattern Recognition, 2010, pp. 2149–2156.

C. Rhemann, Rother, C., Kohli, P., and Gelautz, M., “A spatially varying PSF-based prior for alpha matting”, in Proceedings of the IEEE Computer Society Conference on Computer Vision and Pattern Recognition, 2010, pp. 2149–2156.

R. Rocholz and Jähne, B., “Spatio-temporal measurements of short wind water waves”, in EGU General Assembly 2010, Symposium AS2.2, 2010, pp. EGU2010-5509.

F. Rathke, Hansen, K., Brefeld, U., and Müller, K. - R., “StructRank: A new approach for ligand-based virtual screening”, J. Chem. Inf. Model., vol. 51, pp. 83–92, 2010.

M. Bleyer, Rother, C., and Kohli, P., “Surface stereo with soft segmentation”, in Proceedings of the IEEE Computer Society Conference on Computer Vision and Pattern Recognition, 2010, pp. 1570–1577.

B. Glocker, T. Heibel, H., Navab, N., Kohli, P., and Rother, C., “TriangleFlow: Optical flow with triangulation-based higher-order likelihoods”, in Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), 2010, vol. 6313 LNCS, pp. 272–285.

M. Riedl, “Using Protein Identification Data to Improve Mass Spectrometry Feature Extraction”, University of Heidelberg, 2010.

2009

V. Beushausen, Roetmann, K., Schmunk, W., Wellhausen, M., Garbe, C. S., and Jähne, B., “2D-measurement technique for simultaneous quantitative determination of mixing ratio and velocity field in microfluidic applications”, Imaging Measurement Methods for Flow Analysis, Results of the DFG Priority Programme 1147 Imaging Measurement Methods for Flow Analysis 2003-2009, vol. 106. Springer, p. 155--164, 2009.

A. Shesh, Criminisi, A., Rother, C., and Smyth, G., “3D-aware image editing for out of bounds photography”, in Proceedings - Graphics Interface, 2009, pp. 47–54.

K. Hansen, Rathke, F., Schroeter, T., Rast, G., Fox, T., Kriegl, J. M., and Mika, S., “Bias-correction of regression models: a case study on hERG inhibition”, J. Chem. Inf. Model., vol. 49, no. 6, pp. 1486–1496, 2009.

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