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Publications

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Author Title [ Type(Asc)] Year
Journal Article
Gianniotis, N, Schnörr, C, Molkenthin, C and Bora, S S (2015). Approximate variational inference based on a finite sample of Gaussian latent variables. Patt.~Anal.~ApplPDF icon Technical Report (1.4 MB)
Jäger, M, Kiel, A, Herten, D - P and Hamprecht, F A (2009). Analysis of Single-Molecule Fluorescence Spectroscopic Data with a Markov Modulated Poisson Process. ChemPhysChem. 10:14 2486-2495
Hinterberger, W, Scherzer, O, Schnörr, C and Weickert, J (2002). Analysis of Optical Flow Models in the Framework of Calculus of Variations. Numer. Funct. Anal. Optimiz. 23 69–89
Hayn, M, Beirle, S, Hamprecht, F A, Platt, U, Menze, B H and Wagner, T (2009). Analysing spatio-temporal patterns of the global NO2-distribution retrieved frome GOME satellite observations using a generalized additive model. Atmospheric Chemistry and Physics. 9 9367-9398PDF icon Technical Report (2.52 MB)
Kirchner, M, Saussen, B, Steen, H, Steen, J A J and Hamprecht, F A (2007). amsrpm: Robust Point Matching in Retention Time Alignment of LC/MS Data with R. Journal of Statistical Software. 18 1-12. http://www.jstatsoft.org/v18/i04/paper
Görlitz, L, Hamprecht, F A and Staudacher, M (2009). Allocation of particles to development processes. PatentPDF icon Technical Report (406.7 KB)
Krall, K E, Smith, A W, Takagaki, N and Jähne, B (2019). Air–sea gas exchange at wind speeds up to 85 m/s. Ocean Science. 15 1783-–1799
Jähne, B and Haußecker, H (1998). Air-water gas exchange. Annu. Rev. Fluid Mech. 30 443--468
Frew, N M, Bock, E J, Schimpf, U, Hara, T, Haußecker, H, Edson, J B, McGilles, W R, Nelson, R K, McKenna, S P, Uz, B M and Jähne, B (2004). Air-sea gas transfer: Its dependence on wind stress, small-scale roughness, and surface films. J. Geophys. Res. 109 C08S17
Krah, N, Testa, M, Brons, S, Jäkel, O, Parodi, K, Voss, B and Rinaldi, I (2015). An advanced image processing method to improve the spatial resolution of ion radiographies. Physics in Medicine and Biology. 60 8525. http://stacks.iop.org/0031-9155/60/i=21/a=8525
Schüle, T, Weber, S and Schnörr, C (2005). Adaptive Reconstruction of Discrete-Valued Objects from few Projections. Electr. Notes in Discr. Math. 20 365-384
Banerjee, D, Garbe, C S, Schimpf, U, Jähne, B and Schabel, S (2008). An active thermographic technique for highly resolved heat transport measurements in paper drying. APPITA Journal. 61 244--249. http://search.informit.com.au/documentSummary;dn=113990239180698;res=IELHSS
Lou, X, Schiegg, M and Hamprecht, F A (2014). Active Structured Learning for Cell Tracking: Algorithm, Framework and Usability. IEEE Transactions on Medical Imaging. 33 (4) 849-860PDF icon Technical Report (6.84 MB)
Kandemir, M, Hamprecht, F A, Wojek, C and Schmidt, U (2017). Active machine learning for training an event classification. Patent, Patent Number WO2017032775 A1
Röder, J, Kunzmann, K, Nadler, B and Hamprecht, F A (2012). Active Learning with Distributional Estimates. UAI 2012. Proceedings. 715-725PDF icon Technical Report (267.67 KB)
Hanselmann, M, Röder, J, Köthe, U, Renard, B Y, Heeren, R M A and Hamprecht, F A (2012). Active Learning for Convenient Annotation and Classification of Secondary Ion Mass Spectrometry Images. Analytical Chemistry. 85 (1) 147-155PDF icon Technical Report (2.58 MB)
Wolny, A, Cerrone, L, Vijayan, A, Tofanelli, R, Vilches-Barro, A, Louveaux, M, Wenzel, C, Strauss, S, Wilson-Sanchez, D, Lymbouridou, R, Steigleder, S S, Pape, C, Bailoni, A, Duran-Nebreda, S, Bassel, G W, Lohmann, J U, Tsiantis, M, Hamprecht, F A, Schneitz, K, Maizel, A and Kreshuk, A (2020). Accurate and Versatile 3D Segmentation of Plant Tissues at Cellular Resolution. eLife. 9
Andres, B, Köthe, U, Kröger, T, Helmstaedter, M, Briggmann, K L, Denk, W and Hamprecht, F A (2012). 3D Segmentation of SBFSEM Images of Neuropil by a Graphical Model over Supervoxel Boundaries. Medical Image Analysis. 16 (2012) 796-805PDF icon Technical Report (20.85 MB)
Vianello, A, Manfredi, G, Diebold, M and Jähne, B (2017). 3D reconstruction by a combined structure tensor and Hough transform light field approach. tm - Technisches Messen
Wiehler, K, Heers, J, Schnörr, C, Stiehl, H –S and Grigat, R –R (2001). A 1D analog VLSI implementation for non-linear real-time signal preprocessing. Real–Time Imaging. 7 127–142
inproceedings
Pape, C, Beier, T, Li, P, Jain, V, Brock, D D and Kreshuk, A (2017). Solving Large Multicut Problems for Connectomics via Domain Decomposition. Bioimage Computing Workshop. ICCV. 1-10
Swoboda, P, Savchynskyy, B, Kappes, J H and Schnörr, C (2014). Partial Optimality by Pruning for MAP-inference with General GraphicalModels. CVPR. Proceedings. 1170-1177
Wolf, S, Schott, L, Köthe, U and Hamprecht, F A (2017). Learned Watershed: End-to-End Learning of Seeded Segmentation. ICCV. 2030-2038PDF icon Technical Report (3.76 MB)
Kandemir, M, Feuchtinger, A, Walch, A and Hamprecht, F A (2014). Digital Pathology: Multiple instance learning can detect Barrett'scancer. ISBI. Proceedings. 1348-1351PDF icon Technical Report (2.86 MB)
Milbich, T, Roth, K, Sinha, S, Schmidt, L, Ghassemi, M and Ommer, B (2021). Characterizing Generalization under Out-Of-Distribution Shifts in Deep Metric Learning. https://arxiv.org/abs/2107.09562
In Collection
Jähne, (2020). What controls air-sea gas exchange at extreme wind speeds? Evidence from laboratory experiments. Recent Advances in the Study of Oceanic Whitecaps. Springer. 133–150
Köthe, (2008). What Can We Learn from Discrete Images about the Continuous World. Discrete Geometry for Computer Imagery. Springer. 4992 4-19
Jähne, B, Balschbach, G and Fuß, D (2002). Wellenbewegte Wasseroberfläche. Nahbereichsphotogrammetrie in der Praxis, Beispiele und Problemlösungen. Wichmann. 259--262. http://d-nb.info/96618503X
Berthe, A, Kondermann, D, Jähne, B and Ketzscher, U (2009). The wall PIV measurement technique for near wall flow fields in biofliud mechanics. Imaging Measurement Methods for Flow Analysis, Results of the DFG Priority Programme 1147 Imaging Measurement Methods for Flow Analysis 2003-2009. Springer. 106 11--20
Falkenroth, A, Degreif, K, Jähne, B and Jähne, B (2007). Visualisation of oxygen concentration fields in the mass boundary layer by fluorescence quenching. Transport at the Air Sea Interface --- Measurements, Models and Parameterizations. Springer Verlag
Bergtholdt, M, Cremers, D and Schnörr, C (2005). Variational Segmentation with Shape Priors. Handbook of Mathematical Models in Computer Vision. Springer. 147-160
Schnörr, C, Schüle, T and Weber, S (2007). Variational Reconstruction with DC-Programming. Advances in Discrete Tomography and Its Applications. Birkhäuser, Boston
Ruhnau, P, Kohlberger, T, Nobach, H and Schnörr, C (2004). Variational Optical Flow Estimation for Particle Image Velocimetry. Proc. Lasermethoden in der Strömungsmeßtechnik. Deutsche Gesellschaft für Laser-Anemometrie GALA e.V., Karlsruhe
Vlasenko, A and Schnörr, C (2009). Variational Approaches for Model-Based PIV and Visual Fluid Analysis. Imaging Measurement Methods for Flow Analysis. Springer. 106 247-256
Vlasenko, A and Schnörr, C (2009). Variational Approaches for Model-Based PIV and Visual Fluid Analysis. Imaging Measurement Methods for Flow Analysis. Springer. 106 247-256PDF icon Technical Report (3.39 MB)

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