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2017
S. Peter, Diego, F., Hamprecht, F. A., and Nadler, B., “Cost-efficient Gradient Boosting”, NIPS, poster. 2017.
H. Schilling, Diebold, M., Gutsche, M., and Jähne, B., “On the design of a fractal calibration pattern for improved camera calibration”, tm - Technisches Messen, vol. 84, pp. 440–451, 2017.
J. Kruse, Rother, C., Schmidt, U., and Dresden, T. U., “Learning to Push the Limits of Efficient FFT-based Image Deconvolution - Supplemental Material”, 2017.
F. Rathke, Desana, M., and Schnörr, C., “Locally Adaptive Probabilistic Models for Global Segmentation of Pathological OCT Scans”, MICCAI. Proceedings. pp. 177-184, 2017.PDF icon Technical Report (4.79 MB)
F. Rathke, Desana, M., and Schnörr, C., “Locally Adaptive Probabilistic Models for Global Segmentation of Pathological OCT Scans”, in Proc. MICCAI, 2017.
V. Ulman, Maška, M., Magnusson, K. E. G., Ronneberger, O., Haubold, C., Harder, N., Matula, P., Matula, P., Svoboda, D., Radojevic, M., Smal, I., Rohr, K., Jaldén, J., Blau, H. M., Dzyubachyk, O., Lelieveldt, B., Xiao, P., Li, Y., Cho, S. - Y., Dufour, A., Olivo-Marin, J. C., Reyes-Aldasoro, C. C., Solis-Lemus, J. A., Bensch, R., Brox, T., Stegmaier, J., Mikut, R., Wolf, S., Hamprecht, F. A., Esteves, T., Quelhas, P., Demirel, Ö., Malström, L., Jug, F., Tomančák, P., Meijering, E., Muñoz-Barrutia, A., Kozubek, M., and Ortiz-de-Solorzano, C., “An Objective Comparison of Cell Tracking Algorithms”, Nature Methods, vol. 14, no. 12, pp. 1141-1152, 2017.PDF icon Technical Report (4.24 MB)
V. Ulman, Maška, M., Magnusson, K. E. G., Ronneberger, O., Haubold, C., Harder, N., Matula, P., Matula, P., Svoboda, D., Radojevic, M., Smal, I., Rohr, K., Jaldén, J., Blau, H. M., Dzyubachyk, O., Lelieveldt, B., Xiao, P., Li, Y., Cho, S. - Y., Dufour, A., Olivo-Marin, J. C., Reyes-Aldasoro, C. C., Solis-Lemus, J. A., Bensch, R., Brox, T., Stegmaier, J., Mikut, R., Wolf, S., Hamprecht, F. A., Esteves, T., Quelhas, P., Demirel, Ö., Malström, L., Jug, F., Tomančák, P., Meijering, E., Muñoz-Barrutia, A., Kozubek, M., and Ortiz-de-Solorzano, C., “An Objective Comparison of Cell Tracking Algorithms”, Nature Methods, vol. 14, no. 12, pp. 1141-1152, 2017.PDF icon Technical Report (4.24 MB)
V. Ulman, Maška, M., Magnusson, K. E. G., Ronneberger, O., Haubold, C., Harder, N., Matula, P., Matula, P., Svoboda, D., Radojevic, M., Smal, I., Rohr, K., Jaldén, J., Blau, H. M., Dzyubachyk, O., Lelieveldt, B., Xiao, P., Li, Y., Cho, S. - Y., Dufour, A., Olivo-Marin, J. C., Reyes-Aldasoro, C. C., Solis-Lemus, J. A., Bensch, R., Brox, T., Stegmaier, J., Mikut, R., Wolf, S., Hamprecht, F. A., Esteves, T., Quelhas, P., Demirel, Ö., Malström, L., Jug, F., Tomančák, P., Meijering, E., Muñoz-Barrutia, A., Kozubek, M., and Ortiz-de-Solorzano, C., “An Objective Comparison of Cell Tracking Algorithms”, Nature Methods, vol. 14, no. 12, pp. 1141-1152, 2017.PDF icon Technical Report (4.24 MB)
Ö. Sümer, Dencker, T., and Ommer, B., “Self-supervised Learning of Pose Embeddings from Spatiotemporal Relations in Videos”, in Proceedings of the IEEE International Conference on Computer Vision (ICCV), 2017.PDF icon Paper (3.98 MB)PDF icon Supplementary Material (3.36 MB)
S. Peter, Kirschbaum, E., Both, M., Campbell, L. A., Harvey, B. K., Heins, C., Durstewitz, D., Diego, F., and Hamprecht, F. A., “Sparse convolutional coding for neuronal assembly detection”, NIPS, poster. 2017.
S. Peter, Kirschbaum, E., Both, M., Campbell, L. A., Harvey, B. K., Heins, C., Durstewitz, D., Diego, F., and Hamprecht, F. A., “Sparse convolutional coding for neuronal assembly detection”, NIPS, poster. 2017.
2018
T. Hodaň, Michel, F., Brachmann, E., Kehl, W., Buch, A. Glent, Kraft, D., Drost, B., Vidal, J., Ihrke, S., Zabulis, X., Sahin, C., Manhardt, F., Tombari, F., Kim, T. Kyun, Matas, J., and Rother, C., “BOP: Benchmark for 6D object pose estimation”, in Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), 2018, vol. 11214 LNCS, pp. 19–35.
F. Draxler, “The Energy Landscape of Deep Neural Networks”, Heidelberg University, 2018.
F. Draxler, Veschgini, K., Salmhofer, M., and Hamprecht, F. A., “Essentially No Barriers in Neural Network Energy Landscape”, ICML. Proceedings, vol. 80. p. 1308--1317, 2018.PDF icon Technical Report (685.93 KB)
O. Ghori, Mackowiak, R., Bautista, M., Beuter, N., Drumond, L., Diego, F., and Ommer, B., “Learning to Forecast Pedestrian Intention from Pose Dynamics”, in Intelligent Vehicles, IEEE, 2018, 2018.
O. Ghori, Mackowiak, R., Bautista, M., Beuter, N., Drumond, L., Diego, F., and Ommer, B., “Learning to Forecast Pedestrian Intention from Pose Dynamics”, in Intelligent Vehicles, IEEE, 2018, 2018.
A. Vianello, Ackermann, J., Diebold, M., and Jähne, B., “Robust Hough transform based 3D reconstruction from circular light fields”, in Conference on Computer Vision and Pattern Recognition (CVPR), 2018.
N. Rahaman, Arpit, D., Baratin, A., Draxler, F., Lin, M., Hamprecht, F. A., Bengio, Y., and Courville, A., “On the spectral bias of deep neural networks”, arXiv preprint arXiv:1806.08734, 2018.
H. Schilling, Diebold, M., Rother, C., and Jähne, B., “Trust your Model: Light Field Depth Estimation with inline Occlusion Handling”, CVPR. Proceedings. 2018.PDF icon Technical Report (5.46 MB)
H. Schilling, Diebold, M., Rother, C., and Jähne, B., “Trust your Model: Light Field Depth Estimation with Inline Occlusion Handling”, in Proceedings of the IEEE Computer Society Conference on Computer Vision and Pattern Recognition, 2018, pp. 4530–4538.
2019
A. L. Bendinger, Debus, C., Glowa, C., Karger, C. P., Peter, J., and Storath, M., “Bolus arrival time estimation in dynamic contrast-enhanced magnetic resonance imaging of small animals based on spline models, in press”, Physics in Medicine and Biology, vol. 64, no. 4, 2019.
J. Kleesiek, Morshuis, J. Nikolas, Isensee, F., Deike-Hofmann, K., Paech, D., Kickingereder, P., Köthe, U., Rother, C., Forsting, M., Wick, W., Bendszus, M., Schlemmer, H. Peter, and Radbruch, A., “Can Virtual Contrast Enhancement in Brain MRI Replace Gadolinium?: A Feasibility Study”, Investigative Radiology, vol. 54, pp. 653–660, 2019.
R. Mackowiak, Lenz, P., Ghori, O., Diego, F., Lange, O., and Rother, C., “CEREALS - Cost-Effective REgion-based Active Learning for Semantic Segmentation”, in British Machine Vision Conference 2018, BMVC 2018, 2019.
E. Kirschbaum, Haußmann, M., Wolf, S., Sonntag, H., Schneider, J., Elzoheiry, S., Kann, O., Durstewitz, D., and Hamprecht, F. A., “LeMoNADe: Learned Motif and Neuronal Assembly Detection in calcium imaging videos”, ICLR. Proceedings. 2019.
Y. Bengio, Deleu, T., Rahaman, N., Ke, R., Lachapelle, S., Bilaniuk, O., Goyal, A., and Pal, C., “A Meta-Transfer Objective for Learning to Disentangle Causal Mechanisms”, arXiv preprint arXiv:1901.10912, 2019.PDF icon Technical Report (871.59 KB)
F. E Sanmartin, Damrich, S., and Hamprecht, F. A., “Probabilistic Watershed: Sampling all spanning forests for seeded segmentation and semi-supervised learning”, in Advances in Neural Information Processing Systems, 2019.
M. Desana and Schnörr, C., “Sum-Product Graphical Models”, Machine Learning, 2019.
M. Esposito, Hennersperger, C., Göbl, R., Demaret, L., Storath, M., Navab, N., Baust, M., and Weinmann, A., “Total variation regularization of pose signals with an application to 3D freehand ultrasound”, IEEE Transactions on Medical Imaging, vol. 38(10), pp. 2245-2258, 2019.
2020
A. Wolny, Cerrone, L., Vijayan, A., Tofanelli, R., Vilches-Barro, A., Louveaux, M., Wenzel, C., Strauss, S., Wilson-Sanchez, D., Lymbouridou, R., Steigleder, S. S., Pape, C., Bailoni, A., Duran-Nebreda, S., Bassel, G. W., Lohmann, J. U., Tsiantis, M., Hamprecht, F. A., Schneitz, K., Maizel, A., and Kreshuk, A., “Accurate and Versatile 3D Segmentation of Plant Tissues at Cellular Resolution”, eLife, vol. 9, 2020.
T. Dencker, Klinkisch, P., Maul, S. M., and Ommer, B., “Deep learning of cuneiform sign detection with weak supervision using transliteration alignment”, PLoS ONE, vol. 15, no. 12, 2020.
S. K. Mustikovela, Jampani, V., De Mello, S., Liu, S., Iqbal, U., Rother, C., and Kautz, J., “Self-Supervised Viewpoint Learning From Image Collections”, in CONSAC, 2020.PDF icon PDF (8.77 MB)
M. Desana and Schnörr, C., “Sum-Product Graphical Models”, Machine Learning, vol. 109, pp. 135–173, 2020.
M. Dorkenwald, Büchler, U., and Ommer, B., “Unsupervised Magnification of Posture Deviations Across Subjects”, Proceedings of the IEEE Conference on Computer Vision and Pattern Recognition (CVPR). 2020.PDF icon article.pdf (1.15 MB)
2021
A. Blattmann, Milbich, T., Dorkenwald, M., and Ommer, B., “Behavior-Driven Synthesis of Human Dynamics”, Proceedings of the IEEE Conference on Computer Vision and Pattern Recognition (CVPR). 2021.
E. Fita, Damrich, S., and Hamprecht, F. A., “Directed Probabilistic Watershed”, NeurIPS. Proceedings, vol. 34. 2021.PDF icon Technical Report (957.78 KB)

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