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2017
E. Levinkov, Uhrig, J., Tang, S., Omran, M., Insafutdinov, E., Kirillov, A., Rother, C., Brox, T., Schiele, B., and Andres, B., “Joint graph decomposition & node labeling: Problem, algorithms, applications”, in Proceedings - 30th IEEE Conference on Computer Vision and Pattern Recognition, CVPR 2017, 2017, vol. 2017-Janua, pp. 1904–1912.
A. Kirillov, Schlesinger, D., Zheng, S., Savchynskyy, B., Torr, P. H. S., and Rother, C., “Joint training of generic CNN-CRF models with stochastic optimization”, in Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), 2017, vol. 10112 LNCS, pp. 221–236.
A. Kirillov, Schlesinger, D., Zheng, S., Savchynskyy, B., Torr, P. H. S., and Rother, C., “Joint training of generic CNN-CRF models with stochastic optimization”, in Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), 2017, vol. 10112 LNCS, pp. 221–236.
M. Storath, Weinmann, A., and Unser, M., “Jump-penalized least absolute values estimation of scalar or circle-valued signals”, Information and Inference, vol. 6, no. 3, pp. 225–245, 2017.PDF icon Technical Report (3.4 MB)
L. Schott, “Learned Watershed Algorithm: End-to-End Learning of Seeded Segmentation”, Heidelberg University, 2017.
S. Wolf, Schott, L., Köthe, U., and Hamprecht, F. A., “Learned Watershed: End-to-End Learning of Seeded Segmentation”, ICCV. pp. 2030-2038, 2017.PDF icon Technical Report (3.76 MB)
J. Kruse, Rother, C., Schmidt, U., and Dresden, T. U., “Learning to Push the Limits of Efficient FFT-based Image Deconvolution - Supplemental Material”, 2017.
J. Kruse, Rother, C., and Schmidt, U., “Learning to Push the Limits of Efficient FFT-Based Image Deconvolution”, in Proceedings of the IEEE International Conference on Computer Vision, 2017, vol. 2017-Octob, pp. 4596–4604.
E. Bodnariuc, Petra, S., Schnörr, C., and Voorneveld, J., “A Local Spatio-Temporal Approach to Plane Wave Ultrasound Particle Image Velocimetry”, in Proc. GCPR, 2017.
F. Rathke, Desana, M., and Schnörr, C., “Locally Adaptive Probabilistic Models for Global Segmentation of Pathological OCT Scans”, MICCAI. Proceedings. pp. 177-184, 2017.PDF icon Technical Report (4.79 MB)
F. Rathke, Desana, M., and Schnörr, C., “Locally Adaptive Probabilistic Models for Global Segmentation of Pathological OCT Scans”, in Proc. MICCAI, 2017.
B. Brattoli, Büchler, U., Wahl, A. - S., Schwab, M. E., and Ommer, B., “LSTM Self-Supervision for Detailed Behavior Analysis”, in Proceedings of the IEEE Conference on Computer Vision and Pattern Recognition (CVPR), 2017.PDF icon Article (8.75 MB)
F. Aström, Hühnerbein, R., Savarino, F., Recknagel, J., and Schnörr, C., “MAP Image Labeling Using Wasserstein Messages and Geometric Assignment”, in Proc. SSVM, 2017, vol. 10302.
F. Aström, Hühnerbein, R., Savarino, F., Recknagel, J., and Schnörr, C., “MAP Image Labeling Using Wasserstein Messages and Geometric Assignment”, in Proc. SSVM, 2017, vol. 10302.
M. Kandemir, Hamprecht, F. A., Wojek, C., and Schmidt, U., “Maschinelles Lernen”, Patent, Patent Number WO2017032775A1, 2017.PDF icon Technical Report (317.04 KB)
T. Beier, Pape, C., Rahaman, N., Prange, T., Berg, S., Bock, D., Cardona, A., Knott, G. W., Plaza, S. M., Scheffer, L. K., Köthe, U., Kreshuk, A., and Hamprecht, F. A., “Multicut brings automated neurite segmentation closer to human performance”, Nature Methods, vol. 14, no. 2, pp. 101-102, 2017.
F. Savarino, Hühnerbein, R., Aström, F., Recknagel, J., and Schnörr, C., “Numerical Integration of Riemannian Gradient Flows for Image Labeling”, in Proc. SSVM, 2017, vol. 10302.
F. Savarino, Hühnerbein, R., Aström, F., Recknagel, J., and Schnörr, C., “Numerical Integration of Riemannian Gradient Flows for Image Labeling”, in Proc. SSVM, 2017, vol. 10302.
V. Ulman, Maška, M., Magnusson, K. E. G., Ronneberger, O., Haubold, C., Harder, N., Matula, P., Matula, P., Svoboda, D., Radojevic, M., Smal, I., Rohr, K., Jaldén, J., Blau, H. M., Dzyubachyk, O., Lelieveldt, B., Xiao, P., Li, Y., Cho, S. - Y., Dufour, A., Olivo-Marin, J. C., Reyes-Aldasoro, C. C., Solis-Lemus, J. A., Bensch, R., Brox, T., Stegmaier, J., Mikut, R., Wolf, S., Hamprecht, F. A., Esteves, T., Quelhas, P., Demirel, Ö., Malström, L., Jug, F., Tomančák, P., Meijering, E., Muñoz-Barrutia, A., Kozubek, M., and Ortiz-de-Solorzano, C., “An Objective Comparison of Cell Tracking Algorithms”, Nature Methods, vol. 14, no. 12, pp. 1141-1152, 2017.PDF icon Technical Report (4.24 MB)
V. Ulman, Maška, M., Magnusson, K. E. G., Ronneberger, O., Haubold, C., Harder, N., Matula, P., Matula, P., Svoboda, D., Radojevic, M., Smal, I., Rohr, K., Jaldén, J., Blau, H. M., Dzyubachyk, O., Lelieveldt, B., Xiao, P., Li, Y., Cho, S. - Y., Dufour, A., Olivo-Marin, J. C., Reyes-Aldasoro, C. C., Solis-Lemus, J. A., Bensch, R., Brox, T., Stegmaier, J., Mikut, R., Wolf, S., Hamprecht, F. A., Esteves, T., Quelhas, P., Demirel, Ö., Malström, L., Jug, F., Tomančák, P., Meijering, E., Muñoz-Barrutia, A., Kozubek, M., and Ortiz-de-Solorzano, C., “An Objective Comparison of Cell Tracking Algorithms”, Nature Methods, vol. 14, no. 12, pp. 1141-1152, 2017.PDF icon Technical Report (4.24 MB)
V. Ulman, Maška, M., Magnusson, K. E. G., Ronneberger, O., Haubold, C., Harder, N., Matula, P., Matula, P., Svoboda, D., Radojevic, M., Smal, I., Rohr, K., Jaldén, J., Blau, H. M., Dzyubachyk, O., Lelieveldt, B., Xiao, P., Li, Y., Cho, S. - Y., Dufour, A., Olivo-Marin, J. C., Reyes-Aldasoro, C. C., Solis-Lemus, J. A., Bensch, R., Brox, T., Stegmaier, J., Mikut, R., Wolf, S., Hamprecht, F. A., Esteves, T., Quelhas, P., Demirel, Ö., Malström, L., Jug, F., Tomančák, P., Meijering, E., Muñoz-Barrutia, A., Kozubek, M., and Ortiz-de-Solorzano, C., “An Objective Comparison of Cell Tracking Algorithms”, Nature Methods, vol. 14, no. 12, pp. 1141-1152, 2017.PDF icon Technical Report (4.24 MB)
V. Ulman, Maška, M., Magnusson, K. E. G., Ronneberger, O., Haubold, C., Harder, N., Matula, P., Matula, P., Svoboda, D., Radojevic, M., Smal, I., Rohr, K., Jaldén, J., Blau, H. M., Dzyubachyk, O., Lelieveldt, B., Xiao, P., Li, Y., Cho, S. - Y., Dufour, A., Olivo-Marin, J. C., Reyes-Aldasoro, C. C., Solis-Lemus, J. A., Bensch, R., Brox, T., Stegmaier, J., Mikut, R., Wolf, S., Hamprecht, F. A., Esteves, T., Quelhas, P., Demirel, Ö., Malström, L., Jug, F., Tomančák, P., Meijering, E., Muñoz-Barrutia, A., Kozubek, M., and Ortiz-de-Solorzano, C., “An Objective Comparison of Cell Tracking Algorithms”, Nature Methods, vol. 14, no. 12, pp. 1141-1152, 2017.PDF icon Technical Report (4.24 MB)
A. - S. Wahl, Büchler, U., Brändli, A., Brattoli, B., Musall, S., Kasper, H., Ineichen, B. V., Helmchen, F., Ommer, B., and Schwab, M. E., “Optogenetically stimulating the intact corticospinal tract post-stroke restores motor control through regionalized functional circuit formation”, Nature Communications, p. (ASW & UB contributed equally; BO and MES contributed equally), 2017.
A. Krull, Brachmann, E., Nowozin, S., Michel, F., Shotton, J., and Rother, C., “PoseAgent: Budget-constrained 6D object pose estimation via reinforcement learning”, in Proceedings - 30th IEEE Conference on Computer Vision and Pattern Recognition, CVPR 2017, 2017, vol. 2017-Janua, pp. 2566–2574.
J. Berger, Lenzen, F., Becker, F., Neufeld, A., and Schnörr, C., “{Second-Order Recursive Filtering on the Rigid-Motion Lie Group SE(3) Based on Nonlinear Observations”, J. Math. Imag. Vision, vol. 58, pp. 102–129, 2017.
P. Markowsky, Reith, S., Zuber, T. E., König, R., Rohr, K., and Schnörr, C., “Segmentation of cell structure using model-based set covering with iterative reweighting”, in Proc. ISBI, 2017.
Ö. Sümer, Dencker, T., and Ommer, B., “Self-supervised Learning of Pose Embeddings from Spatiotemporal Relations in Videos”, in Proceedings of the IEEE International Conference on Computer Vision (ICCV), 2017.PDF icon Paper (3.98 MB)PDF icon Supplementary Material (3.36 MB)
M. Hullin, Klein, R., Schultz, T., Yao, A., Li, W., Hosseini Jafari, O., and Rother, C., “Semantic-Aware Image Smoothing”, Vision, Modeling, and Visualization, 2017.
T. Milbich, Bautista, M., Sutter, E., and Ommer, B., “Unsupervised Video Understanding by Reconciliation of Posture Similarities”, in Proceedings of the IEEE International Conference on Computer Vision (ICCV), 2017.
2018
T. Hodaň, Michel, F., Brachmann, E., Kehl, W., Buch, A. Glent, Kraft, D., Drost, B., Vidal, J., Ihrke, S., Zabulis, X., Sahin, C., Manhardt, F., Tombari, F., Kim, T. Kyun, Matas, J., and Rother, C., “BOP: Benchmark for 6D object pose estimation”, in Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), 2018, vol. 11214 LNCS, pp. 19–35.
A. Arnab, Zheng, S., Jayasumana, S., Romera-paredes, B., Kirillov, A., Savchynskyy, B., Rother, C., Kahl, F., and Torr, P., “Conditional Random Fields Meet Deep Neural Networks for Semantic Segmentation”, Cvpr, vol. XX, pp. 1–15, 2018.
N. Sayed, Brattoli, B., and Ommer, B., “Cross and Learn: Cross-Modal Self-Supervision”, in German Conference on Pattern Recognition (GCPR) (Oral), Stuttgart, Germany, 2018.PDF icon Article (891.47 KB)PDF icon Oral slides (9.17 MB)
A. Sanakoyeu, Bautista, M., and Ommer, B., “Deep Unsupervised Learning of Visual Similarities”, Pattern Recognition, vol. 78, 2018.PDF icon PDF (8.35 MB)
A. - S. Wahl, Erlebach, E., Brattoli, B., Büchler, U., Kaiser, J., Ineichen, V. B., Mosberger, A. C., Schneeberger, S., Imobersteg, S., Wieckhorst, M., Stirn, M., Schroeter, A., Ommer, B., and Schwab, M. E., “Early reduced behavioral activity induced by large strokes affects the efficiency of enriched environment in rats”, Sage Journals, vol. Journal of Cerebral Blood Flow & Metabolism, 2018.PDF icon 0271678x18777661.pdf (770.87 KB)
A. - S. Wahl, Erlebach, E., Brattoli, B., Büchler, U., Kaiser, J., Ineichen, V. B., Mosberger, A. C., Schneeberger, S., Imobersteg, S., Wieckhorst, M., Stirn, M., Schroeter, A., Ommer, B., and Schwab, M. E., “Early reduced behavioral activity induced by large strokes affects the efficiency of enriched environment in rats”, Sage Journals, vol. Journal of Cerebral Blood Flow & Metabolism, 2018.PDF icon 0271678x18777661.pdf (770.87 KB)

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