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2009

M. Hayn, Beirle, S., Hamprecht, F. A., Platt, U., Menze, B. H., and Wagner, T., “Analysing spatio-temporal patterns of the global NO₂-distribution retrieved frome GOME satellite observations using a generalized additive model”, Atmospheric Chemistry and Physics, vol. 9, pp. 9367-9398, 2009.

Technical Report (2.52 MB)

M. Jäger, Kiel, A., Herten, D. - P., and Hamprecht, F. A., “Analysis of Single-Molecule Fluorescence Spectroscopic Data with a Markov Modulated Poisson Process”, ChemPhysChem, vol. 10:14, pp. 2486-2495, 2009.

F. O. Kaster, Kelm, B. Michael, Zechmann, C. M., Weber, M. - A., Hamprecht, F. A., and Nix, O., “Classification of Spectroscopic Images in the DIROlab Environment”, in World Congress on Medical Physics and Biomedical Engineering, September 7 - 12, 2009, Munich, Germany, 2009, vol. 25/V, p. 252--255.

Technical Report (145.73 KB)

B. H. Menze, Kelm, B. Michael, Masuch, R., Himmelreich, U., Bachert, P., Petrich, W., and Hamprecht, F. A., “A Comparison of Random Forest and its Gini Importance with Standard Chemometric Methods for the Feature Selection and Classification of Spectral Data”, BMC Bioinformatics, vol. 10:213, 2009.

Technical Report (675 KB)

M. Frank, Plaue, M., and Hamprecht, F. A., “Denoising of Continuous-Wave Time-Of-Flight Depth Images Using Confidence Measures”, Optical Engineering, vol. 48, 077003, 2009.

Technical Report (2.5 MB)

B. Michael Kelm, Menze, B. H., Nix, O., Zechmann, C. M., and Hamprecht, F. A., “Estimating Kinetic Parameter Maps from Dynamic Contrast-Enhanced MRI using Spatial Prior Knowledge”, IEEE Transaction on Medical Imaging, vol. 28:10, pp. 1534-1547, 2009.

Technical Report (419.8 KB)

M. Hanselmann, Köthe, U., Renard, B. Y., Kirchner, M., Heeren, R. M. A., and Hamprecht, F. A., “Multivariate Watershed Segmentation of Compositional Data”, in Proceedings of the 15th International Conference on Discrete Geometry for Computer Imagery (DGCI), in press, 2009, vol. 5810, pp. 180-192.

Technical Report (1.25 MB)

S. Trittler and Hamprecht, F. A., “Near-Optimum Sampling Design and an Efficient Algorithm for Single Tone Frequency Estimation”, Digital Signal Processing, vol. 19, pp. 628-639, 2009.

Technical Report (511.23 KB)

L. Görlitz, Menze, B. H., Kelm, B. Michael, and Hamprecht, F. A., “Processing Spectral Data”, Surface and Interface Analysis, vol. 41, pp. 636-644, 2009.

Technical Report (4.17 MB)

B. Andres, Köthe, U., Bonea, A., Nadler, B., and Hamprecht, F. A., “Quantitative Assessment of Image Segmentation Quality by Random Walk Relaxation Times”, in Pattern Recognition. 31st DAGM Symposium, Jena, Germany, September 9-11, 2009. Proceedings, 2009, vol. 5748, pp. 502-511.

Technical Report (3.08 MB)

M. Staudacher, Hamprecht, F. A., and Görlitz, L., “Self Adjustment of Scanning Electron Microscopes / Selbstadaptivität von Rasterelektronenmikroskopen”, Patent, Patent Number WO2009062781A1, 2009.

Technical Report (46.64 KB)

M. Frank, Plaue, M., Rapp, H., Köthe, U., Jähne, B., and Hamprecht, F. A., “Theoretical and Experimental Error Analysis of Continuous-Wave Time-Of-Flight Range Cameras”, Optical Engineering, vol. 48, 013602, 2009.

Technical Report (2.03 MB)

M. Frank, Plaue, M., Rapp, H., Köthe, U., Jähne, B., and Hamprecht, F. A., “Theoretical and experimental error analysis of continuous-wave time-of-flight range cameras”, Opt. Eng., vol. 48, p. 013602, 2009.

M. Hanselmann, Köthe, U., Kirchner, M., Renard, B. Y., Amstalden, E. R., Glunde, K., Heeren, R. M. A., and Hamprecht, F. A., “Towards Digital Staining using Imaging Mass Spectrometry and Random Forests”, Journal of Proteome Research, vol. 8, pp. 3558-3567, 2009.

Technical Report (1.47 MB)

B. Y. Renard, Kirchner, M., Monigatti, F., Ivanov, A. R., Rappsilber, J., Winter, D., Steen, J. A. J., Hamprecht, F. A., and Steen, H., “When Less Can Yield More - Computational Preprocessing of MS/MS Spectra for Peptide Identification Preprocessing”, Proteomics, vol. 9, pp. 4978-4984, 2009.

Technical Report (901.78 KB)

2008

M. Hanselmann, Kirchner, M., Renard, B. Y., Amstalden, E. R., Glunde, K., Heeren, R. M. A., and Hamprecht, F. A., “Concise Representation of MS Images by Probabilistic Latent Semantic Analysis”, Analytical Chemistry, vol. 80, pp. 9649-9658, 2008.

Technical Report (3.91 MB)

J. A. J. Steen, Steen, H., Georgi, A., Parker, K. C., Springer, M., Kirchner, M., Hamprecht, F. A., and Kirschner, M. W., “Different Phosphorylation States of the Anaphase Promoting Complex in Response to Anti-Mitotic Drugs: A Quantitative Proteomic Analysis”, Proceedings of the National Academy of Sciences, vol. 105, pp. 6069-6074, 2008.

Technical Report (173.02 KB)

B. Andres, Kondermann, C., Kondermann, D., Köthe, U., Hamprecht, F. A., and Garbe, C. S., “On errors-in-variables regression with arbitrary covariance and its application to optical flow estimation”, Computer Vision and Pattern Recognition, 2008. CVPR 2008. IEEE Conference on, pp. 1-6, 2008.

Technical Report (1.58 MB)

B. Andres, Kondermann, C., Kondermann, D., Hamprecht, F. A., and Garbe, C. S., “On errors-in-variables regression with arbitrary covariance and its application to optical flow estimation”, in IEEE Conference on Computer Vision and Pattern Recognition, CVPR 2008, 2008, p. 1--6.

M. Staudacher, Hamprecht, F. A., and Görlitz, L., “Method for processing an intensity image of a microscope”, Patent, Patent Number: WO2008034721A1, 2008.

Technical Report (39.81 KB)

B. H. Menze, Kelm, B. Michael, Weber, M. - A., Bachert, P., and Hamprecht, F. A., “Mimicking the human expert: pattern recognition for an automated assessment of data quality in MRSI”, Magnetic Resonance in Medicine, vol. 59, pp. 1457-1466, 2008.

Technical Report (1.45 MB)

B. Y. Renard, Kirchner, M., Steen, H., Steen, J. A. J., and Hamprecht, F. A., “NITPICK: Peak Identification for Mass Spectrometry Data”, BMC Bioinformatics, vol. 9, p. 355, 2008.

Technical Report (643.89 KB)

M. Jäger and Hamprecht, F. A., “Principal Component Imagery for the Quality Monitoring of Dynamic Laser Welding Processes”, IEEE Transactions on Industrial Electronics, vol. 56:4, pp. 1307-1313, 2008.

T. König, Menze, B. H., Kirchner, M., Monigatti, F., Parker, K. C., Patterson, T., Steen, J. J., Hamprecht, F. A., and Steen, H., “Robust Prediction of the MASCOT Score for an Improved Quality Assessment in Mass Spectrometric Proteomics”, Journal of Proteome Research, vol. 7, pp. 3708-3717, 2008.

Technical Report (1.16 MB)

B. Andres, Köthe, U., Helmstaedter, M., Denk, W., and Hamprecht, F. A., “Segmentation of SBFSEM Volume Data of Neural Tissue by Hierarchical Classification”, in Pattern Recognition. 30th DAGM Symposium Munich, Germany, June 10-13, 2008. Proceedings, 2008, vol. 5096, pp. 142-152.

Technical Report (1.21 MB)

M. Jäger, Humbert, S., and Hamprecht, F. A., “Sputter Tracking for the Automatic Monitoring of Industrial Laser Welding Processes”, IEEE Transactions on Industrial Electronics, vol. 55, pp. 2177-2184, 2008.

Technical Report (1.83 MB)

H. Rapp, Frank, M., Hamprecht, F. A., and Jähne, B., “A Theoretical and Experimental Investigation of the Systematic Errors and Statistical Uncertainties of Time-of-Flight Cameras”, Int. J. Intelligent Systems Technologies and Applications, vol. 5, pp. 402-413, 2008.

Technical Report (798.23 KB)

H. Rapp, Frank, M., Hamprecht, F. A., and Jähne, B., “A theoretical and experimental investigation of the systematic errors and statistical uncertainties of time-of-flight cameras”, Int. J. Intelligent Systems Technologies and Applications, vol. 5, p. 402--413, 2008.

M. Jäger, Knoll, C., and Hamprecht, F. A., “Weakly Supervised Learning of a Classifier for Unusual Event Detection”, IEEE Transactions on Image Processing, vol. 17, pp. 1700-1708, 2008.

Technical Report (295.32 KB)

2007

C. Kondermann, Kondermann, D., Jähne, B., Garbe, C. S., Schnörr, C., and Jähne, B., “An adaptive confidence measure for optical flows based on linear subspace projections”, in Proceedings of the 29th DAGM Symposium on Pattern Recognition, 2007, vol. 4713, p. 132--141.

M. Kirchner, Saussen, B., Steen, H., Steen, J. A. J., and Hamprecht, F. A., “amsrpm: Robust Point Matching in Retention Time Alignment of LC/MS Data with R”, Journal of Statistical Software, vol. 18, pp. 1-12, 2007.

B. Michael Kelm, Menze, B. H., Zechmann, C. M., Baudendistel, K. T., and Hamprecht, F. A., “Automated Estimation of Tumor Probability in Prostate MRSI: Pattern Recognition vs. Quantification”, Magnetic Resonance in Medicine, vol. 57, pp. 150-159, 2007.

Technical Report (348.05 KB)

C. Weber, Zechmann, C. M., Kelm, B. Michael, Zamecnik, R., Hendricks, D., Waldherr, R., Hamprecht, F. A., Delorme, S., Bachert, P., and Ikinger, U., “Comparison of correctness of manuel and automatic evaluation of MR-spectrum with prostrate cancer”, Der Urologe, vol. 46, p. 1252, 2007.

C. S. Garbe, Schnörr, C., and Jähne, B., “Fluid flow estimation through integration of physical flow configurations”, in Proceedings of the 29th DAGM Symposium on Pattern Recognition, 2007, p. 92--101.

B. H. Menze, Kelm, B. Michael, and Hamprecht, F. A., “From eigenspots to fisherspots -- latent spaces in the nonlinear detection of spot patterns in a highly variable background”, in Advances in data analysis, 2007, vol. 33, pp. 255-262.

Technical Report (248.87 KB)

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